Prof Krasimira Tsaneva-Atanasova - Publications - CEMPS

Engineering, Mathematics and Physical Sciences Intranet

Prof Krasimira Tsaneva-Atanasova

Publications

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| 2024 | 2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | 2007 | 2006 | 2005 | 2004 | 2003 |

2024

Challen R, Chatzilena A, Qian G, Oben G, Kwiatkowska R, Hyams C, Finn A, Tsaneva-Atanasova K, Danon L. (2024) Combined multiplex panel test results are a poor estimate of disease prevalence without adjustment for test error, PLOS Computational Biology, volume 20, no. 4, pages e1012062-e1012062, DOI:10.1371/journal.pcbi.1012062. [PDF]
Jaitner A, Vaudel M, Tsaneva-Atanasova K, Njølstad PR, Jacobsson B, Bowden J, Johansson S, Freathy RM. (2024) Smoking during pregnancy and its effect on placental weight: a Mendelian randomization study, BMC Pregnancy and Childbirth, volume 24, no. 1, article no. 238, DOI:10.1186/s12884-024-06431-0. [PDF]
Ivanova D, Voliotis M, Tsaneva‐Atanasova K, O'Byrne KT, Li X. (2024) NK3R signalling in the posterodorsal medial amygdala is involved in stress‐induced suppression of pulsatile LH secretion in female mice, Journal of Neuroendocrinology, volume 36, no. 5, DOI:10.1111/jne.13384. [PDF]
Voliotis M, Abbara A, Prague JK, Veldhuis JD, Dhillo WS, Tsaneva-Atanasova K. (2024) HormoneBayes: A novel Bayesian framework for the analysis of pulsatile hormone dynamics, PLOS Computational Biology, volume 20, no. 2, pages e1011928-e1011928, DOI:10.1371/journal.pcbi.1011928. [PDF]
Hanassab S, Abbara A, Yeung AC, Voliotis M, Tsaneva-Atanasova K, Kelsey TW, Trew GH, Nelson SM, Heinis T, Dhillo WS. (2024) The prospect of artificial intelligence to personalize assisted reproductive technology, npj Digital Medicine, volume 7, no. 1, article no. 55, DOI:10.1038/s41746-024-01006-x. [PDF]
Qiu J, Voliotis M, Bosch MA, Li XF, Zweifel LS, Tsaneva-Atanasova K, O’Byrne KT, Rønnekleiv OK, Kelly MJ. (2024) Estradiol elicits distinct firing patterns in arcuate nucleus kisspeptin neurons of females through altering ion channel conductances, DOI:10.1101/2024.02.20.581121. [PDF]
Wang G. (2024) Time series analysis and modelling of the freezing of gait phenomenon.
Nechyporenko K, Voliotis M, Li XF, Hollings O, Ivanova D, Walker JJ, O’Byrne KT, Tsaneva-Atanasova K. (2024) Neuronal Network Dynamics in the Posterodorsal Amygdala: Shaping Reproductive Hormone Pulsatility, DOI:10.1101/2024.01.21.574304. [PDF]
Dixon G, Hague S, Mulholland S, Adamali H, Khin AMN, Thould H, Connon R, Minnis P, Murtagh E, Khan F. (2024) Real-world experience of nintedanib for progressive fibrosing interstitial lung disease in the UK, ERJ Open Research, volume 10, no. 1, pages 00529-2023, DOI:10.1183/23120541.00529-2023. [PDF]
Yu J, Li X-F, Tsaneva-Atanasova K, Zavala E, O’Byrne KT. (2024) Chemogenetic activation of PVN CRH neurons disrupts the estrous cycle and LH dynamics in female mice, Frontiers in Endocrinology, volume 14, DOI:10.3389/fendo.2023.1322662. [PDF]
Abbara A, Adams S, Phylactou M, Izzi-Engbeaya C, Mills EG, Thurston L, Koysombat K, Hanassab S, Heinis T, Tan TM-M. (2024) Quantifying the variability in the assessment of reproductive hormone levels, Fertil Steril, volume 121, no. 2, pages 334-345, DOI:10.1016/j.fertnstert.2023.11.010. [PDF]

2023

Challen R, Chatzilena A, Qian G, Oben G, Kwiatkowska R, Hyams C, Finn A, Tsaneva-Atanasova K, Danon L. (2023) Combined multiplex panel test results are a poor estimate of disease prevalence without adjustment for test error, DOI:10.1101/2023.12.14.23299860. [PDF]
H. Erhardt A, Tsaneva-Atanasova KT-A, Lines GT, Martens EA. (2023) Dynamical Systems, PDEs and Networks for Biomedical Applications: Mathematical Modeling, Analysis and Simulations, DOI:10.3389/978-2-8325-1458-0. [PDF]
Dixon G, Hague S, Mulholland S, Khin AMN, Thould H, Connon R, Minnis P, Murtagh E, Khan F, Toor S. (2023) Real-world data from 24 UK centres for the use of nintedanib for progressive fibrosing interstitial lung disease, ERS International Congress 2023 abstracts, ILD/DPLD of known origin, DOI:10.1183/13993003.congress-2023.pa404. [PDF]
Kraus S, Łapińska U, Chawla K, Baker E, Attrill EL, O’Neill P, Farbos A, Jeffries A, Galyov EE, Korbsrisate S. (2023) Phage-induced efflux down-regulation boosts antibiotic efficacy, DOI:10.1101/2023.09.21.558807.
Słowiński P, White A, Lison S, Sullivan S, Emmens T, Self P, Wileman J, Karl A, Tsaneva-Atanasova K. (2023) The potential of digital behavioural tests as a diagnostic aid for psychosis, PLOS Digit Health, volume 2, no. 9, DOI:10.1371/journal.pdig.0000339. [PDF]
Jaitner A, Vaudel M, Tsaneva-Atanasova K, Njølstad PR, Jacobsson B, Bowden J, Johansson S, Freathy RM. (2023) Smoking during pregnancy and its effect on placental weight: A Mendelian randomization study, medRxiv, DOI:10.1101/2023.08.24.23294537. [PDF]
Tsaneva-Atanasova K, Scotton C. (2023) How to handle big data for disease stratification in respiratory medicine?, Thorax, volume 78, no. 7, pages 640-642, DOI:10.1136/thorax-2023-220138. [PDF]
Evans JO, Tsaneva-Atanasova K, Buckingham G. (2023) Using immersive virtual reality to remotely examine performance differences between dominant and non-dominant hands, Virtual Reality, volume 27, no. 3, pages 2211-2226, DOI:10.1007/s10055-023-00794-z. [PDF]
Zhang B, Phetsang W, Stone MRL, Kc S, Butler MS, Cooper MA, Elliott AG, Łapińska U, Voliotis M, Tsaneva-Atanasova K. (2023) Synthesis of vancomycin fluorescent probes that retain antimicrobial activity, identify Gram-positive bacteria, and detect Gram-negative outer membrane damage, Commun Biol, volume 6, no. 1, DOI:10.1038/s42003-023-04745-x. [PDF]
Gramegna A, Narayana JK, Amati F, Stainer A, Wu B, Morlacchi LC, Segal LN, Tsaneva-Atanasova K, Marchisio P, Chotirmall SH. (2023) Microbial Inflammatory Networks in Bronchiectasis Exacerbators With Pseudomonas aeruginosa, CHEST, volume 164, no. 1, pages 65-68, DOI:10.1016/j.chest.2023.02.014. [PDF]
Blyth M, Tsaneva-Atanasova K, Marucci L, Renson L. (2023) Numerical methods for control-based continuation of relaxation oscillations, Nonlinear Dynamics, volume 111, no. 9, pages 7975-7992, DOI:10.1007/s11071-023-08288-y. [PDF]
Słowiński P, White A, Lison S, Sullivan S, Emmens T, Self P, Wileman J, Karl A, Tsaneva-Atanasova K. (2023) Digital behavioural tests as diagnostic aid for psychosis, DOI:10.1101/2023.01.14.23284551. [PDF]
Erhardt AH, Tsaneva-Atanasova K, Lines GT, Martens EA. (2023) Editorial: Dynamical systems, PDEs and networks for biomedical applications: Mathematical modeling, analysis and simulations, Frontiers in Physics, volume 10, DOI:10.3389/fphy.2022.1101756. [PDF]
Cockerell A, Wright L, Dattani A, Guo G, Smith A, Tsaneva-Atanasova K, Richards DM. (2023) Biophysical models of early mammalian embryogenesis, Stem Cell Reports, volume 18, no. 1, pages 26-46, DOI:10.1016/j.stemcr.2022.11.021. [PDF]
Narayana JK, Aliberti S, Mac Aogáin M, Jaggi TK, Ali NABM, Ivan FX, Cheng HS, Yip YS, Vos MIG, Low ZS. (2023) Microbial Dysregulation of the Gut-Lung Axis in Bronchiectasis, American Journal of Respiratory and Critical Care Medicine, volume 207, no. 7, pages 908-920, DOI:10.1164/rccm.202205-0893oc. [PDF]
Wang A, Sieber J, Young WR, Tsaneva-Atanasova K. (2023) Time Series Analysis and Modeling of the Freezing of Gait Phenomenon, SIAM Journal on Applied Dynamical Systems, volume 22, no. 2, pages 825-849, DOI:10.1137/22m1484341. [PDF]
Ashwin P, Creaser J, Tsaneva-Atanasova K. (2023) Quasipotentials for coupled escape problems and the gate-height bifurcation, Phys Rev E, volume 107, no. 1-1, DOI:10.1103/PhysRevE.107.014213. [PDF]
Tiew PY, Narayana JK, Quek MSL, Ang YY, Ko FWS, Poh ME, Jaggi TK, Xu H, Thng KX, Koh MS. (2023) Sensitisation to recombinantAspergillus fumigatusallergens and clinical outcomes in COPD, European Respiratory Journal, volume 61, no. 1, pages 2200507-2200507, DOI:10.1183/13993003.00507-2022.

2022

Griffith T, Mellor J, Tsaneva-Atanasova K. (2022) Spike-Timing Dependent Plasticity (STDP), Biophysical Models, Encyclopedia of Computational Neuroscience, Springer New York, 3258-3262, DOI:10.1007/978-1-0716-1006-0_359. [PDF]
Adams S, Voliotis M, Phylactou M, Izzi-Engbeaya C, Mills E, Thurston L, Hanassab S, Tsaneva-Atanasova K, Heinis T, Comninos A. (2022) Quantifying the Variability in the Outpatient Assessment of Reproductive Hormone levels, Endocrine Abstracts, DOI:10.1530/endoabs.86.p117.
Voliotis M, Abbara A, Prague JK, Veldhuis JD, Dhilo WS, Tsaneva-Atanasova K. (2022) LBMON233 Hormonebayes: A Novel Bayesian Toolbox For Analysis Of Pulsatile Hormone Dynamics, Journal of the Endocrine Society, volume 6, no. Supplement_1, pages a648-a649, DOI:10.1210/jendso/bvac150.1341.
Davy O, Perrins R, Lavigne M, Kremer E, Tsaneva-Atanasova K, Ashby M, Pickering AE. (2022) Noradrenergic cross-modular reciprocal inhibition within the locus coeruleus, DOI:10.1101/2022.09.07.506929.
Lass G, Li XF, Voliotis M, Wall E, de Burgh RA, Ivanova D, McIntyre C, Lin X, Colledge WH, Lightman SL. (2022) GnRH pulse generator frequency is modulated by kisspeptin and GABA‐glutamate interactions in the posterodorsal medial amygdala in female mice, Journal of Neuroendocrinology, volume 34, no. 11, DOI:10.1111/jne.13207. [PDF]
Voliotis M, Hanassab S, Abbara A, Heinis T, Dhillo WS, Tsaneva-Atanasova K. (2022) Quantitative approaches in clinical reproductive endocrinology, Current Opinion in Endocrine and Metabolic Research, volume 27, DOI:10.1016/j.coemr.2022.100421.
Plain Z, Voliotis M, McArdle CA, Tsaneva-Atanasova K. (2022) Modelling KNDy neurons and gonadotropin-releasing hormone pulse generation, Current Opinion in Endocrine and Metabolic Research, volume 27, DOI:10.1016/j.coemr.2022.100407.
Challen R. (2022) Addressing local and national priorities for health data science research during the COVID-19 pandemic.
Baker E, Challenor P, Bamsey I, Muntoni F, Manzur AY, Tsaneva-Atanasova K. (2022) Fully Personalised Degenerative Disease Modelling - A Duchenne Muscular Dystrophy Case Study, DOI:10.1101/2022.07.28.22278103. [PDF]
Challen RJ, Griffith GJ, Lacasa L, Tsaneva-Atanasova K. (2022) Algorithmic hospital catchment area estimation using label propagation, BMC Health Services Research, volume 22, no. 1, article no. 828, DOI:10.1186/s12913-022-08127-7. [PDF]
Łapińska U, Voliotis M, Lee KK, Campey A, Stone MRL, Tuck B, Phetsang W, Zhang B, Tsaneva-Atanasova K, Blaskovich MAT. (2022) Fast bacterial growth reduces antibiotic accumulation and efficacy, eLife, volume 11, DOI:10.7554/elife.74062. [PDF]
Narayana JK, Tsaneva-Atanasova K, Chotirmall SH. (2022) Microbiomics-focused Data Integration: A Fresh Solve for the Rubik’s Cube of Endophenotyping?, American Journal of Respiratory and Critical Care Medicine, volume 206, no. 4, pages 365-368, DOI:10.1164/rccm.202205-0860ed. [PDF]
Glover G, Voliotis M, Łapińska U, Invergo BM, Soanes D, O’Neill P, Moore K, Nikolic N, Petrov PG, Milner DS. (2022) Nutrient and salt depletion synergistically boosts glucose metabolism in individual Escherichia coli cells, Communications Biology, volume 5, no. 1, article no. 385, DOI:10.1038/s42003-022-03336-6. [PDF]
Voliotis M, Abbara A, Prague JK, Veldhuis JD, Dhillo WS, Tsaneva-Atanasova K. (2022) HormoneBayes: a novel Bayesian framework for the analysis of pulsatile hormone dynamics, DOI:10.1101/2022.03.14.22272000. [PDF]
Voliotis M, Plain Z, Li XF, McArdle CA, O’Byrne KT, Tsaneva‐Atanasova K. (2022) Mathematical models in GnRH research, Journal of Neuroendocrinology, volume 34, no. 5, DOI:10.1111/jne.13085. [PDF]
Challen R, Brooks-Pollock E, Tsaneva-Atanasova K, Danon L. (2022) Meta-analysis of the severe acute respiratory syndrome coronavirus 2 serial intervals and the impact of parameter uncertainty on the coronavirus disease 2019 reproduction number, Statistical Methods in Medical Research, volume 31, no. 9, pages 1686-1703, DOI:10.1177/09622802211065159.

2021

Chen X, Shen Y, Zavala E, Tsaneva-Atanasova K, Upton T, Russell G, Tino P. (2021) SOMiMS - Topographic Mapping in the Model Space, Intelligent Data Engineering and Automated Learning – IDEAL 2021 22nd International Conference, IDEAL 2021, Manchester, UK, November 25–27, 2021, Proceedings, Springer, 502-510.
Narayana JK, Mac Aogáin M, Goh WWB, Xia K, Tsaneva-Atanasova K, Chotirmall SH. (2021) Mathematical-based microbiome analytics for clinical translation, Computational and Structural Biotechnology Journal, volume 19, pages 6272-6281, DOI:10.1016/j.csbj.2021.11.029.
Voliotis M, Li XF, De Burgh R, Lass G, Ivanova D, McIntyre C, O’Byrne KT, Tsaneva-Atanasova K. (2021) Modulation of pulsatile GnRH dynamics across the ovarian cycle: the role of glutamatergic transmission in the arcuate kisspeptin network, DOI:10.1101/2021.03.22.436428.
Voliotis M, Li XF, De Burgh RA, Lass G, Ivanova D, McIntyre C, O'Byrne K, Tsaneva-Atanasova K. (2021) Modulation of pulsatile GnRH dynamics across the ovarian cycle via changes in the network excitability and basal activity of the arcuate kisspeptin network, Elife, volume 10, DOI:10.7554/eLife.71252. [PDF]
Evans BD, Słowiński P, Hattersley AT, Jones SE, Sharp S, Kimmitt RA, Weedon MN, Oram RA, Tsaneva-Atanasova K, Thomas NJ. (2021) Estimating disease prevalence in large datasets using genetic risk scores, Nature Communications, volume 12, no. 1, article no. 6441, DOI:10.1038/s41467-021-26501-7. [PDF]
Łapińska U, Voliotis M, Lee KK, Campey A, Stone MRL, Phetsang W, Zhang B, Tsaneva-Atanasova K, Blaskovich MAT, Pagliara S. (2021) Fast bacterial growth reduces antibiotic accumulation and efficacy, DOI:10.1101/2021.10.18.464851. [PDF]
Prince LY, Bacon T, Humphries R, Tsaneva-Atanasova K, Clopath C, Mellor JR. (2021) Separable actions of acetylcholine and noradrenaline on neuronal ensemble formation in hippocampal CA3 circuits, PLOS Computational Biology, volume 17, no. 10, pages e1009435-e1009435, DOI:10.1371/journal.pcbi.1009435.
Gonzalez Herrero ME, Kuehn C, Tsaneva-Atanasova K. (2021) Reduced Models of Cardiomyocytes Excitability: Comparing Karma and FitzHugh–Nagumo, Bulletin of Mathematical Biology, volume 83, no. 8, pages 88-88, DOI:10.1007/s11538-021-00898-0. [PDF]
Narayana JK, Aogáin MM, Ali NABM, Tsaneva-Atanasova K, Chotirmall SH. (2021) Similarity network fusion (SNF) for the integration of multi-omics and microbiomes in respiratory disease, European Respiratory Journal, DOI:10.1183/13993003.01016-2021. [PDF]
Challen R, Tsaneva-Atanasova K, Pitt M, Edwards T, Gompels L, Lacasa L, Brooks-Pollock E, Danon L. (2021) Estimates of regional infectivity of COVID-19 in the United Kingdom following imposition of social distancing measures, Philosophical Transactions of the Royal Society B: Biological Sciences, volume 376, pages 20200280-20200280, article no. 1829, DOI:10.1098/rstb.2020.0280. [PDF]
Mac Aogáin M, Narayana JK, Tiew PY, Ali NABM, Yong VFL, Jaggi TK, Lim AYH, Keir HR, Dicker AJ, Thng KX. (2021) Integrative microbiomics in bronchiectasis exacerbations, Nature Medicine, volume 27, no. 4, pages 688-699, DOI:10.1038/s41591-021-01289-7. [PDF]
Wedgwood K, Slowinski P, Manson J, Tsaneva-Atanasova K, Krauskopf B. (2021) Robust spike timing in an excitable cell with delayed feedback, Journal of the Royal Society Interface, volume 18, DOI:10.1098/rsif.2021.0029. [PDF]
McArdle CA, Voliotis M, Tsaneva-Atanasova K, Fowkes RC. (2021) Chapter 7 - Gonadotropin-Releasing Hormone Receptors and Signaling, Cellular Endocrinology in Health and Disease (Second Edition), Academic Press, 149-181, DOI:10.1016/B978-0-12-819801-8.00007-7. [PDF]
Challen R, Brooks-Pollock E, Read JM, Dyson L, Tsaneva-Atanasova K, Danon L. (2021) Risk of mortality in patients infected with SARS-CoV-2 variant of concern 202012/1: matched cohort study, BMJ, volume 372, pages n579-n579, DOI:10.1136/bmj.n579. [PDF]
Arthur T, Harris D, Allen K, Naylor C, Wood G, Vine S, Wilson M, Tsaneva-Atanasova K, Buckingham G. (2021) Visuo-motor attention during object interaction in children with developmental coordination disorder, Cortex, DOI:10.1016/j.cortex.2021.02.013. [PDF]
Challen R, Brooks-Pollock E, Read JM, Dyson L, Tsaneva-Atanasova K, Danon L. (2021) Increased hazard of mortality in cases compatible with SARS-CoV-2 variant of concern 202012/1 - a matched cohort study, DOI:10.1101/2021.02.09.21250937. [PDF]
Liu H, Prashant NM, Spurr LF, Bousounis P, Alomran N, Ibeawuchi H, Sein J, Słowiński P, Tsaneva-Atanasova K, Horvath A. (2021) scReQTL: an approach to correlate SNVs to gene expression from individual scRNA-seq datasets, BMC Genomics, volume 22, no. 1, pages 40-40, DOI:10.1186/s12864-020-07334-y. [PDF]
Coste A, Bardy BG, Janaqi S, Słowiński P, Tsaneva-Atanasova K, Goupil JL, Marin L. (2021) Correction to: Decoding identity from motion: how motor similarities colour our perception of self and others, Psychol Res, volume 85, no. 2, DOI:10.1007/s00426-020-01361-w. [PDF]
Coste A, Bardy BG, Janaqi S, Słowiński P, Tsaneva-Atanasova K, Goupil JL, Marin L. (2021) Decoding identity from motion: how motor similarities colour our perception of self and others, Psychol Res, volume 85, no. 2, pages 509-519, DOI:10.1007/s00426-020-01290-8. [PDF]

2020

Abbara A, Eng PC, Phylactou M, Clarke SA, Richardson R, Sykes CM, Phumsatitpong C, Mills E, Modi M, Izzi-Engbeaya C. (2020) Kisspeptin receptor agonist has therapeutic potential for female reproductive disorders, J Clin Invest, volume 130, no. 12, DOI:10.1172/JCI139681. [PDF]
Zavala E, Voliotis M, Zerenner T, Tabak J, Walker JJ, Li XF, Terry JR, Lightman SL, O’Byrne K, Tsaneva-Atanasova K. (2020) Dynamic Hormone Control of Stress and Fertility, Frontiers in Physiology, volume 11, pages 1457-1457, DOI:10.3389/fphys.2020.598845. [PDF]
Parakkal Unni M, Menon PP, Livi L, Wilson MR, Young WR, Bronte-Stewart HM, Tsaneva-Atanasova K. (2020) Data-Driven Prediction of Freezing of Gait Events From Stepping Data, Frontiers in Medical Technology, volume 2, pages 581264-581264, DOI:10.3389/fmedt.2020.581264. [PDF]
Parakkal Unni M, Menon PP, Wilson MR, Tsaneva-Atanasova K. (2020) Ankle Push-off Based Mathematical Model for Freezing of Gait in Parkinson’s Disease, Frontiers in Bioengineering and Biotechnology, volume 8, pages 1197-1197, DOI:10.3389/fbioe.2020.552635.
Creaser J, Ashwin P, Tsaneva-Atanasova K. (2020) Sequential Escapes and Synchrony Breaking for Networks of Bistable Oscillatory Nodes, SIAM Journal on Applied Dynamical Systems, volume 19, pages 2829-2846, article no. 4, DOI:10.1137/20M1345773. [PDF]
Creaser J, Lin C, Ridler T, Brown JT, D’Souza W, Seneviratne U, Cook M, Terry JR, Tsaneva-Atanasova K. (2020) Domino-like transient dynamics at seizure onset in epilepsy, PLOS Computational Biology, volume 16, no. 9, pages e1008206-e1008206, DOI:10.1371/journal.pcbi.1008206. [PDF]
Słowiński P, Li M, Restrepo P, Alomran N, Spurr LF, Miller C, Tsaneva-Atanasova K, Horvath A. (2020) GeTallele: A Method for Analysis of DNA and RNA Allele Frequency Distributions, Frontiers in Bioengineering and Biotechnology, volume 8, pages 1021-1021, DOI:10.3389/fbioe.2020.01021. [PDF]
Pope RJP, Garner KL, Voliotis M, Lay AC, Betin VMS, Tsaneva-Atanasova K, Welsh GI, Coward RJM, McArdle CA. (2020) An information theoretic approach to insulin sensing by human kidney podocytes, Molecular and Cellular Endocrinology, pages 110976-110976, DOI:10.1016/j.mce.2020.110976. [PDF]
Cama J, Voliotis M, Metz J, Smith A, Iannucci J, Keyser UF, Tsaneva-Atanasova K, Pagliara S. (2020) Single-cell microfluidics facilitates the rapid quantification of antibiotic accumulation in Gram-negative bacteria, Lab on a Chip, volume 20, no. 15, pages 2765-2775, DOI:10.1039/d0lc00242a. [PDF]
Mac Aogáin M, Lau KJX, Cai Z, Narayana JK, Purbojati RW, Drautz-Moses DI, Gaultier NE, Jaggi TK, Tiew PY, Ong TH. (2020) Metagenomics Reveals a Core Macrolide Resistome Related to Microbiota in Chronic Respiratory Disease, American Journal of Respiratory and Critical Care Medicine, pages rccm.201911-2202OC, DOI:10.1164/rccm.201911-2202OC. [PDF]
Tiew PY, Ko FWS, Narayana JK, Poh ME, Xu H, Neo HY, Loh L-C, Ong C-K, Aogáin MM, Tan JHY. (2020) ‘HIGH RISK’ CLINICAL AND INFLAMMATORY CLUSTERS IN COPD OF CHINESE DESCENT, Chest, DOI:10.1016/j.chest.2020.01.043. [PDF]
Evans BD, Słowiński P, Hattersley AT, Jones SE, Sharp S, Kimmitt RA, Weedon MN, Oram RA, Tsaneva-Atanasova K, Thomas NJ. (2020) Estimating population level disease prevalence using genetic risk scores, DOI:10.1101/2020.02.20.20025528. [PDF]
Challen R, Tsaneva-Atanasova K, Edwards T, Gompels L, Dayer M, Pitt M, Danon L. (2020) Factors influencing digital review of pathology test results in an inpatient setting: a cross-sectional study, JAMIA Open, DOI:10.1093/jamiaopen/ooaa003. [PDF]
S\lowiński P, Al-Ramadhani S, Tsaneva-Atanasova K. (2020) Neurologically Motivated Coupling Functions in Models of Motor Coordination, SIAM Journal on Applied Dynamical Systems, volume 19, pages 208-232, article no. 1, DOI:10.1137/19M1279381. [PDF]
Spurr LF, Alomran N, Bousounis P, Reece-Stremtan D, Prashant NM, Liu H, Słowiński P, Li M, Zhang Q, Sein J. (2020) ReQTL: identifying correlations between expressed SNVs and gene expression using RNA-sequencing data, Bioinformatics, volume 36, no. 5, pages 1351-1359, DOI:10.1093/bioinformatics/btz750. [PDF]
Baldemir H, Avitabile D, Tsaneva-Atanasova K. (2020) Pseudo-plateau bursting and mixed-mode oscillations in a model of developing inner hair cells, Communications in Nonlinear Science and Numerical Simulation, volume 80, pages 104979-104979, DOI:10.1016/j.cnsns.2019.104979. [PDF]

2019

Dhillo W, Prague J, Voliotis M, Clarke S, Comninos A, Abbara A, Jayasena C, Roberts R, Yang L, Veldhuis J. (2019) OR11-4 Determining the Relationship between Hot Flushes and LH Pulses in Menopausal Women Using Mathematical Modelling, Journal of the Endocrine Society, volume 3, no. Supplement_1, pages or11-or14, DOI:10.1210/js.2019-or11-4.
Dhillo W, Liang S, Kinghorn A, Voliotis M, Prague J, Veldhuis J, Tsaneva-Atanasova K, McArdle C, Li HWR, Cass T. (2019) SAT-LB040 Measuring LH Pulsatility in Patients with Reproductive Disorders Using a Novel Robotic Aptamer-Enabled Electrochemical Reader (RAPTER), Journal of the Endocrine Society, volume 3, no. Supplement_1, DOI:10.1210/js.2019-sat-lb040. [PDF]
Mac Aogain M, Kumar JN, Lim AYH, Low TB, Ong TH, Chew FT, Oliver B, Keir HR, Koh MS, Abisheganaden JA. (2019) "Integrative Microbiomics" Through Similarity Network Fusion Identifies Clinically Relevant Bronchiectasis Phenotypes, AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, volume 199. [PDF]
Smith P, Buhl E, Tsaneva-Atanasova K, Hodge JJL. (2019) Shaw and Shal voltage-gated potassium channels mediate circadian changes in Drosophila clock neuron excitability, The Journal of Physiology, DOI:10.1113/JP278826. [PDF]
Voliotis M, Feng Li X, De Burgh R, Lass G, Lightman SL, O’Byrne KT, Tsaneva-Atanasova K. (2019) The origin of GnRH pulse generation: An integrative mathematical-experimental approach, Journal of Neuroscience, DOI:10.1523/JNEUROSCI.0828-19.2019. [PDF]
Dhillo W, Liang S, Kinghorn A, Voliotis M, Prague J, Veldhuis J, Tsaneva-Atanasova K, McArdle C, Li R, Cass A. (2019) Measuring LH Pulsatility in Patients with Reproductive Disorders Using a Novel Robotic Aptamer-Enabled Electrochemical Reader (RAPTER), HUMAN REPRODUCTION, volume 34, pages 125-126. [PDF]
Prague JK, Voliotis M, Clarke S, Comninos AN, Abbara A, Jayasena CN, Roberts RE, Yang L, Veldhuis JD, Tsaneva-Atanasova K. (2019) Determining the relationship between hot flushes and LH pulses in menopausal women using mathematical modelling, The Journal of Clinical Endocrinology & Metabolism, DOI:10.1210/jc.2018-02797.
Curran JA, Buhl E, Tsaneva-Atanasova K, Hodge JJL. (2019) Age-dependent changes in clock neuron structural plasticity and excitability are associated with a decrease in circadian output behaviour and sleep, Neurobiology of Aging, DOI:10.1016/j.neurobiolaging.2019.01.025. [PDF]
Liang S, Kinghorn AB, Voliotis M, Prague JK, Veldhuis JD, Tsaneva-Atanasova K, McArdle CA, Li RHW, Cass AEG, Dhillo WS. (2019) Measuring luteinising hormone pulsatility with a robotic aptamer-enabled electrochemical reader, Nature Communications, volume 10, no. 1, DOI:10.1038/s41467-019-08799-6. [PDF]
Zavala E, Wedgwood KCA, Voliotis M, Tabak J, Spiga F, Lightman SL, Tsaneva-Atanasova K. (2019) Mathematical Modelling of Endocrine Systems, Trends in Endocrinology & Metabolism, volume 30, no. 4, pages 244-257, DOI:10.1016/j.tem.2019.01.008. [PDF]
Williams CA, Wedgwood KCA, Mohammadi H, Prouse K, Tomlinson OW, Tsaneva-Atanasova K. (2019) Cardiopulmonary responses to maximal aerobic exercise in patients with cystic fibrosis, PLoS ONE, volume 14, article no. 2, DOI:10.1371/journal.pone.0211219.
Słowiński P, Baldemir H, Wood G, Alizadehkhaiyat O, Coyles G, Vine S, Williams G, Tsaneva-Atanasova K, Wilson M. (2019) Gaze training supports self-organization of movement coordination in children with developmental coordination disorder, Scientific Reports, volume 9, no. 1, pages 1712-1712, DOI:10.1038/s41598-018-38204-z. [PDF]
Williams CAP, Wedgwood K, Mohammadi H, Prouse K, Tomlinson O, Tsaneva K. (2019) Cardiopulmonary Responses to Maximal Aerobic Exercise in Patients with Cystic Fibrosis (data set), DOI:10.24378/exe.1105.
Challen R, Denny J, Pitt M, Gompels L, Edwards T, Tsaneva-Atanasova K. (2019) Artificial intelligence, bias and clinical safety, BMJ Quality & Safety, DOI:10.1136/bmjqs-2018-008370. [PDF]

2018

. (2018) Mathematics for Healthcare, Frontiers Media SA, DOI:10.3389/978-2-88945-577-5. [PDF]
Slowinski P, Baxter P, Tsaneva K. (2018) A feasibility study using movement and perspective-taking as a diagnostic aid for psychosis. [PDF]
Alobaid H, Voliotis M, Tsaneva-Atanasova K, McArdle C. (2018) Measuring of information transfer via gonadotropin-releasing hormone receptors (GnRHR) shows a remarkable loss of information through signalling, Endocrine Abstracts, DOI:10.1530/endoabs.59.p130.
Voliotis M, Garner KL, Alobaid H, Tsaneva-Atanasova K, McArdle CA. (2018) Exploring Dynamics and Noise in Gonadotropin-Releasing Hormone (GnRH) Signaling, United States, 405-429, DOI:10.1007/978-1-4939-8618-7_19. [PDF]
Wedgwood KCA, Tabak J, Tsaneva-Atanasova K. (2018) Modelling Ion Channels, Mathematical Modelling in Plant Biology, Springer International Publishing, 37-52, DOI:10.1007/978-3-319-99070-5_3.
Slowinski P, Al-Ramadhani S, Tsaneva-Atanasova KT. (2018) Relaxation oscillations and canards in the Jirsa–Kelso excitator model: global flow perspective, The European Physical Journal Special Topics, volume 227(5), pages 591-601, DOI:10.1140/epjst/e2018-00129-2. [PDF]
Tsaneva-Atanasova K, Diaz-Zuccarini V. (2018) Editorial: Mathematics for Healthcare as Part of Computational Medicine, Frontiers in Physiology, volume 9, pages 985-985, DOI:10.3389/fphys.2018.00985. [PDF]
Smith P, Arias R, Sonti S, Odgerel Z, Santa-Maria I, McCabe BD, Tsaneva-Atanasova K, Louis ED, Hodge JJL, Clark LN. (2018) A Drosophila Model of Essential Tremor, Scientific Reports, volume 8, no. 1, article no. 7664, DOI:10.1038/s41598-018-25949-w. [PDF]
Tait L, Wedgwood K, Tsaneva-Atanasova K, Brown JT, Goodfellow M. (2018) Control of clustered action potential firing in a mathematical model of entorhinal cortex stellate cells, J Theor Biol, volume 449, pages 23-34, DOI:10.1016/j.jtbi.2018.04.013. [PDF]
Ashwin P, Creaser J, Tsaneva-Atanasova K. (2018) Sequential escapes: onset of slow domino regime via a saddle connection, The European Physical Journal Special Topics, volume 227, pages 1091-1100, article no. 10, DOI:10.1140/epjst/e2018-800038-5. [PDF]
Pratap A, Garner KL, Voliotis M, Tsaneva-Atanasova K, McArdle CA. (2018) Authors response to communication about mathematical modeling of gonadotropin-releasing hormone signaling, Molecular and Cellular Endocrinology, volume 470, pages 36-37, DOI:10.1016/j.mce.2017.09.035.
Creaser J, Tsaneva-Atanasova K, Ashwin P. (2018) Sequential noise-induced escapes for oscillatory network dynamics, SIAM Journal on Applied Dynamical Systems, volume 17(1), pages 500-525, DOI:10.1137/17M1126412.
Kusev P, Schaik P, Tsaneva-Atanasova K, Juliusson A, Chater N. (2018) Adaptive Anchoring Model: How Static and Dynamic Presentations of Time Series Influence Judgments and Predictions, Cognitive science, volume 42, pages 77-102, article no. 1.

2017

Garner KL, Tsaneva-Atanasova K, McArdle CA. (2017) GnRH Action: GnRH Signaling, Endocrinology (Switzerland), 35-70, DOI:10.1007/978-3-319-44441-3_2.
Ashwin P, Creaser J, Tsaneva-Atanasova K. (2017) Fast and slow domino regimes in transient network dynamics, Phys Rev E, volume 96, no. 5-1, DOI:10.1103/PhysRevE.96.052309. [PDF]
Cohen L, Khoramshahi M, Salesse RN, Bortolon C, Slowinski PM, Zhai C, Tsaneva-Atanasova K, di Bernardo M, Capdevielle D, Marin L. (2017) Influence of facial feedback and mind perception during a cooperative human-robot task in schizophrenia, Scientific Reports, volume 7(1), pages 15023-15023, DOI:10.1038/s41598-017-14773-3.
Rahi SJ, Larsch J, Pecani K, Katsov AY, Mansouri N, Tsaneva-Atanasova K, Sontag ED, Cross FR. (2017) Oscillatory stimuli differentiate adapting circuit topologies, Nature Methods, volume 14(10), pages 1010-1016, DOI:10.1038/nmeth.4408. [PDF]
Coste A, Slowiński P, Tsaneva-Atanasova K, Bardy BG, Marin L. (2017) Mapping Individual Postural Signatures, Psychology Press, Studies in Perception and Action XIV: Nineteenth International Conference on Perception and Action, pages 105-109.
Voliotis M, Garner KL, Alobaid H, Tsaneva-Atanasova K, McArdle CA. (2017) Gonadotropin-releasing hormone signaling: An information theoretic approach, Molecular and Cellular Endocrinology, volume 463, pages 106-115, DOI:10.1016/j.mce.2017.07.028. [PDF]
Y. Shen, P. Tino, K. Tsaneva-Atanasova. (2017) Classification of sparsely and irregularly sampled time series: A learning in model space approach, 2017 International Joint Conference on Neural Networks (IJCNN), Anchorage, Ak, Usa, 14th - 19th May 2017, DOI:10.1109/IJCNN.2017.7966321.
Betterton RT, Broad LM, Tsaneva-Atanasova K, Mellor JR. (2017) Acetylcholine modulates gamma frequency oscillations in the hippocampus by activation of muscarinic M1 receptors, European Journal of Neuroscience, DOI:10.1111/ejn.13582. [PDF]
Shen Y, Tino P, Tsaneva-Atanasova K. (2017) Classification framework for partially observed dynamical systems, Physical Review E, volume 95, no. 4, pages 043303-043303-21, DOI:10.1103/PhysRevE.95.043303. [PDF]
Garner KL, Voliotis M, Alobaid H, Perrett RM, Pham T, Tsaneva-Atanasova K, McArdle CA. (2017) Information Transfer via Gonadotropin-Releasing Hormone Receptors to ERK and NFAT: Sensing GnRH and Sensing Dynamics, Journal of the Endocrine Society, volume 1, pages 260-277, article no. 4, DOI:10.1210/js.2016-1096.
Garner KL, Tsaneva-Atanasova K, McArdle CA. (2017) GnRH Action, Endocrinology of the Testis and Male Reproduction, Springer International Publishing, 1-36, DOI:10.1007/978-3-319-29456-8_2-1. [PDF]
Słowiński P, Alderisio F, Zhai C, Shen Y, Tino P, Bortolon C, Capdevielle D, Cohen L, Khoramshahi M, Billard A. (2017) Unravelling socio-motor biomarkers in schizophrenia, npj Schizophrenia, volume 3, no. 1, article no. 8, DOI:10.1038/s41537-016-0009-x. [PDF]
Pratap A, Garner KL, Voliotis M, Tsaneva-Atanasova K, McArdle CA. (2017) Mathematical modeling of gonadotropin-releasing hormone signaling, Molecular and Cellular Endocrinology, volume 449, pages 42-55, DOI:10.1016/j.mce.2016.08.022. [PDF]

2016

Wedgwood KCA, Richardson SJ, Morgan NG, Tsaneva-Atanasova K. (2016) Spatiotemporal dynamics of insulitis in human type 1 diabetes, Frontiers in Physiology, volume 7, article no. DEC, DOI:10.3389/fphys.2016.00633.
Zhai C, Alderisio F, Słowiński P, Tsaneva-Atanasova K, di Bernardo M. (2016) Design of a Virtual Player for Joint Improvisation with Humans in the Mirror Game, PLoS ONE, volume 11, no. 4, pages e0154361-e0154361, DOI:10.1371/journal.pone.0154361. [PDF]
Movassagh M, Alomran N, Mudvari P, Dede M, Dede C, Kowsari K, Restrepo P, Cauley E, Bahl S, Li M. (2016) RNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing data, Nucleic Acids Research, DOI:10.1093/nar/gkw757. [PDF]
Słowiński P, Tsaneva-Atanasova K, Krauskopf B. (2016) Effects of time-delay in a model of intra- and inter-personal motor coordination, The European Physical Journal Special Topics, volume 225, no. 13, pages 2591-2600, DOI:10.1140/epjst/e2015-50327-6. [PDF]
Avitabile D, Słowiński P, Bardy B, Tsaneva-Atanasova K. (2016) Beyond in-phase and anti-phase coordination in a model of joint action, Biological Cybernetics, volume 110(2), pages 201-216, DOI:10.1007/s00422-016-0691-9. [PDF]
Griffith T, Tsaneva-Atanasova K, Mellor JR. (2016) Control of Ca2+ Influx and Calmodulin Activation by SK-Channels in Dendritic Spines, PLoS Comput Biol, volume 12, no. 5, pages e1004949-e1004949, DOI:10.1371/journal.pcbi.1004949. [PDF]
Mina P, Tsaneva-Atanasova K, Bernardo MD. (2016) Entrainment and Control of Bacterial Populations: An in Silico Study over a Spatially Extended Agent Based Model, ACS Synthetic Biology, volume 5, no. 7, pages 639-653, DOI:10.1021/acssynbio.5b00243. [PDF]
Atherton LA, Prince LY, Tsaneva-Atanasova K. (2016) Bifurcation analysis of a two-compartment hippocampal pyramidal cell model, Journal of Computational Neuroscience, pages 1-16, DOI:10.1007/s10827-016-0606-8. [PDF]
Słowiński P, Zhai C, Alderisio F, Salesse R, Gueugnon M, Marin L, Bardy BG, di Bernardo M, Tsaneva-Atanasova K. (2016) Dynamic similarity promotes interpersonal coordination in joint action, Journal of The Royal Society Interface, volume 13, no. 116, DOI:10.1098/rsif.2015.1093. [PDF]
Booth CA, Witton J, Nowacki J, Tsaneva-Atanasova K, Jones MW, Randall AD, Brown JT. (2016) Altered Intrinsic Pyramidal Neuron Properties and Pathway-Specific Synaptic Dysfunction Underlie Aberrant Hippocampal Network Function in a Mouse Model of Tauopathy, J Neurosci, volume 36, no. 2, pages 350-363, DOI:10.1523/JNEUROSCI.2151-15.2016. [PDF]
Garner KL, Perrett RM, Voliotis M, Bowsher C, Pope GR, Pham T, Caunt CJ, Tsaneva-Atanasova K, McArdle CA. (2016) Information Transfer in Gonadotropin-releasing Hormone (GnRH) Signaling, Journal of Biological Chemistry, volume 291, no. 5, pages 2246-2259, DOI:10.1074/jbc.m115.686964. [PDF]

2015

Pratap A, Pham T, Garner K, Tsaneva-Atanasova K, McArdle C. (2015) Feedback and GnRH pulse frequency decoding: a mathematical model for GnRH signalling in gonadotrophs, Endocrine Abstracts, DOI:10.1530/endoabs.38.p330. [PDF]
Garner K, Perrett R, Voliotis M, Pham T, Tsaneva-Atanasova K, McArdle C. (2015) An information theoretic approach to GnRH signalling, Endocrine Abstracts, DOI:10.1530/endoabs.37.ep163.
Garner K, Perrett R, Voliotis M, Pham T, Tsaneva-Atanasova K, McArdle C. (2015) Information transfer in GnRH signalling: ERK-mediated feedback loops control hormone sensing, Endocrine Abstracts, DOI:10.1530/endoabs.38.p359.
Griffith T, Mellor J, Tsaneva-Atanasova K. (2015) A spatiotemporal model of spine calcium dynamics in the hippocampus, BMC neuroscience, volume 16, no. Suppl 1, pages P268-P268, DOI:10.1186/1471-2202-16-s1-p268.
Warburton JM, Whitcomb DJ, Tsaneva-Atanasova K, Cho K. (2015) Investigating the effects of beta-amyloid on hippocampal signalling in Alzheimer's disease, BMC neuroscience, volume 16, no. Suppl 1, pages P34-P34, DOI:10.1186/1471-2202-16-s1-p34.
Betterton R, Mellor J, Tsaneva-Atanasova K. (2015) Modulation of hippocampal gamma oscillations by acetylcholine: insights from mathematical and in vitro optogenetic models, BMC neuroscience, volume 16, no. Suppl 1, pages P267-P267, DOI:10.1186/1471-2202-16-s1-p267.
Zhai C, Alderisio F, Tsaneva-Atanasova K, di Bernardo M. (2015) A model predictive approach to control the motion of a virtual player in the mirror game, 2015 54th IEEE Conference on Decision and Control (CDC), 15th - 18th Dec 2015, 2015 54th IEEE Conference on Decision and Control (CDC), DOI:10.1109/cdc.2015.7402695. [PDF]
Griffith T, Mellor J, Tsaneva-Atanasova K. (2015) Spike-Timing Dependent Plasticity (STDP), Biophysical Models, Encyclopedia of Computational Neuroscience, Springer New York, 2803-2807, DOI:10.1007/978-1-4614-6675-8_359. [PDF]
Zhai C, Alderisio A, Tsaneva-Atanasova KT, di Bernardo M. (2015) A Model Predictive Approach to Control the Motion of a Virtual Player in the Mirror Game, 54th Annual Conference on Decision and Control (CDC), Osaka, Japan, 15th - 18th Dec 2015, Decision and Control (CDC), 2015 IEEE 54th Annual Conference on, pages 3175-3180, DOI:10.13140/RG.2.1.3627.3123.
Tamagnini F, Novelia J, Kerrigan TL, Brown JT, Tsaneva-Atanasova KT, Randall AD. (2015) Altered intrinsic excitability of hippocampal CA1 pyramidal neurons in aged PDAPP mice, Front. Cell. Neurosci, volume 9, article no. 372, DOI:10.3389/fncel.2015.00372.
Matyjaszkiewicz A, Venturi E, O’Brien F, Iida T, Nishi M, Takeshima H, Tsaneva-Atanasova KT, Sitsapesan R. (2015) Subconductance Gating and Voltage Sensitivity of Sarcoplasmic Reticulum K+ Channels: A Modeling Approach, Biophysical Journal, volume 109, no. 2, pages 265-276, DOI:10.1016/j.bpj.2015.06.020.
Iosub R, Avitabile D, Grant L, Tsaneva-Atanasova K, Kennedy H. (2015) Calcium-Induced Calcium Release during Action Potential Firing in Developing Inner Hair Cells, Biophysical Journal, volume 108, no. 5, pages 1003-1012, DOI:10.1016/j.bpj.2014.11.3489. [PDF]
Vine SJ, Uiga L, Lavric A, Moore LJ, Tsaneva-Atanasova K, Wilson MR. (2015) Individual reactions to stress predict performance during a critical aviation incident, Anxiety Stress Coping, volume 28, no. 4, pages 467-477, DOI:10.1080/10615806.2014.986722. [PDF]

2014

Chao Zhai, Alderisio F, Tsaneva-Atanasova K, di Bernardo M. (2014) Adaptive tracking control of a virtual player in the mirror game, Decision and Control (CDC), 2014 IEEE 53rd Annual Conference on, Decision and Control (CDC), 2014 IEEE 53rd Annual Conference on, pages 7005-7010.
Slowinski P, Rooke E, Di Bernardo M, Tsaneva-Atanasova K. (2014) Kinematic characteristics of motion in the mirror game, Systems, Man and Cybernetics (SMC), 2014 IEEE International Conference on, Systems, Man and Cybernetics (SMC), 2014 IEEE International Conference on, pages 748-753, DOI:10.1109/SMC.2014.6974000.
Zhai C, Alderisio F, Tsaneva-Atanasova K, Di Bernardo M. (2014) A novel cognitive architecture for a human-like virtual player in the mirror game, Systems, Man and Cybernetics (SMC), 2014 IEEE International Conference on, Systems, Man and Cybernetics (SMC), 2014 IEEE International Conference on, pages 754-759, DOI:10.1109/SMC.2014.6974001.
Griffith T, Mellor J, Tsaneva-Atanasova K. (2014) Spike Timing-Dependent Plasticity (STDP), Biophysical Models, Encyclopedia of Computational Neuroscience, Springer New York, 1-5, DOI:10.1007/978-1-4614-7320-6_359-1. [PDF]
Perrett R, Voliotis M, Armstrong S, Pope G, Tsaneva-Atanasova K, McArdle C. (2014) Systems approaches to understanding GnRH signalling, Endocrine Abstracts, volume 34, DOI:10.1530/endoabs.34.S1.1.
Perrett RM, Voliotis M, Armstrong SP, Fowkes RC, Pope GR, Tsaneva-Atanasova K, McArdle CA. (2014) Pulsatile Hormonal Signaling to Extracellular Signal-Regulated Kinase: Exploring System Sensitivity to Gonadotropin-Releasing Hormone Pulse Frequency and Width, Journal of Biological Chemistry, volume 289(11), pages 7873-7883, DOI:10.1074/jbc.M113.532473.

2013

Matyjaszkiewicz A, Venturi E, Yamazaki D, Nishi M, Tsaneva-Atanasova K, Takeshima H, Sitsapesan R. (2013) Voltage-Dependent Stochastic Gating Models of TRIC-B Channels, BIOPHYSICAL JOURNAL, volume 104, no. 2, pages 104A-104A, DOI:10.1016/j.bpj.2012.11.609. [PDF]
Osinga HM, Tsaneva-Atanasova KT. (2013) Geometric analysis of transient bursts, CHAOS, volume 23, no. 4, article no. ARTN 046107, DOI:10.1063/1.4826655. [PDF]
Doyle OM, Tsaneva-Atansaova K, Harte J, Tiffin PA, Tino P, Díaz-Zuccarini V. (2013) Bridging Paradigms: Hybrid Mechanistic-Discriminative Predictive Models, Biomedical Engineering, IEEE Transactions on, volume 60, no. 3, pages 735-742, DOI:10.1109/TBME.2013.2244598.
Champneys A, Tsaneva-Atanasova K. (2013) Dynamical Systems Theory, Bifurcation Analysis, Encyclopedia of Systems Biology, Springer New York, 632-637, DOI:10.1007/978-1-4419-9863-7_270. [PDF]
Nowacki J, Osinga HM, Tsaneva-Atanasova KT. (2013) Continuation-Based Numerical Detection of After-Depolarization and Spike-Adding Thresholds, Neural Computation, volume 25, no. 4, pages 877-900, DOI:10.1162/neco_a_00425. [PDF]
Perrett RM, Fowkes RC, Caunt CJ, Tsaneva-Atanasova K, Bowsher CG, McArdle CA. (2013) Signaling to extracellular signal-regulated kinase from ErbB1 kinase and protein kinase C: feedback, heterogeneity, and gating, J Biol Chem, volume 288, no. 29, pages 21001-21014, DOI:10.1074/jbc.M113.455345. [PDF]
Tigaret CM, Tsaneva-Atanasova K, Collingridge GL, Mellor JR. (2013) Wavelet transform-based de-noising for two-photon imaging of synaptic Ca2+ transients, Biophys J, volume 104, no. 5, pages 1006-1017, DOI:10.1016/j.bpj.2013.01.015. [PDF]
Mina P, di Bernardo M, Savery NJ, Tsaneva-Atanasova K. (2013) Modelling emergence of oscillations in communicating bacteria: a structured approach from one to many cells, J R Soc Interface, volume 10, no. 78, DOI:10.1098/rsif.2012.0612. [PDF]
Venturi E, Matyjaszkiewicz A, Pitt SJ, Tsaneva-Atanasova K, Nishi M, Yamazaki D, Takeshima H, Sitsapesan R. (2013) TRIC-B channels display labile gating: evidence from the TRIC-A knockout mouse model, Pflugers Arch, volume 465, no. 8, pages 1135-1148, DOI:10.1007/s00424-013-1251-y. [PDF]

2012

Gorochowski TE, Matyjaszkiewicz A, Todd T, Oak N, Kowalska K, Reid S, Tsaneva-Atanasova KT, Savery NJ, Grierson CS, di Bernardo M. (2012) BSim: An agent-based tool for modeling bacterial populations in systems and synthetic biology, PLoS ONE, volume 7, no. 8, DOI:10.1371/journal.pone.0042790.
Tsaneva-Atanasova K, Mina P, Caunt CJ, Armstrong SP, McArdle CA. (2012) Decoding GnRH neurohormone pulse frequency by convergent signalling modules, J R Soc Interface, volume 9, no. 66, pages 170-182, DOI:10.1098/rsif.2011.0215. [PDF]
Finch AR, Caunt CJ, Perrett RM, Tsaneva-Atanasova K, McArdle CA. (2012) Dual specificity phosphatases 10 and 16 are positive regulators of EGF-stimulated ERK activity: indirect regulation of ERK signals by JNK/p38 selective MAPK phosphatases, Cell Signal, volume 24, no. 5, pages 1002-1011, DOI:10.1016/j.cellsig.2011.12.021. [PDF]
Tsaneva-Atanasova K, Caunt CJ, Armstrong SP, Perrett RM, McArdle CA. (2012) Decoding neurohormone pulse frequency by convergent signalling modules, Biochem Soc Trans, volume 40, no. 1, pages 273-278, DOI:10.1042/BST20110645. [PDF]
Nowacki J, Osinga HM, Tsaneva-Atanasova K. (2012) Dynamical systems analysis of spike-adding mechanisms in transient bursts, J Math Neurosci, volume 2, no. 1, DOI:10.1186/2190-8567-2-7. [PDF]
Galfré E, Pitt SJ, Venturi E, Sitsapesan M, Zaccai NR, Tsaneva-Atanasova K, O'Neill S, Sitsapesan R. (2012) FKBP12 activates the cardiac ryanodine receptor Ca2+-release channel and is antagonised by FKBP12.6, PLoS One, volume 7, no. 2, DOI:10.1371/journal.pone.0031956. [PDF]
Kusev P, Tsaneva-Atanasova K, van Schaik P, Chater N. (2012) Modeling judgment of sequentially presented categories using weighting and sampling without replacement, Behav Res Methods, volume 44, no. 4, pages 1129-1134, DOI:10.3758/s13428-012-0218-9. [PDF]
Marten F, Tsaneva-Atanasova K, Giuggioli L. (2012) Bacterial secretion and the role of diffusive and subdiffusive first passage processes, PLoS One, volume 7, no. 8, DOI:10.1371/journal.pone.0041421. [PDF]
Osinga HM, Sherman A, Tsaneva-Atanasova K. (2012) CROSS-CURRENTS BETWEEN BIOLOGY AND MATHEMATICS: THE CODIMENSION OF PSEUDO-PLATEAU BURSTING, Discrete Contin Dyn Syst Ser A, volume 32, no. 8, pages 2853-2877, DOI:10.3934/dcds.2012.32.2853. [PDF]
Granqvist E, Wysham D, Hazledine S, Kozlowski W, Sun J, Charpentier M, Martins TV, Haleux P, Tsaneva-Atanasova K, Downie JA. (2012) Buffering capacity explains signal variation in symbiotic calcium oscillations, Plant Physiol, volume 160, no. 4, pages 2300-2310, DOI:10.1104/pp.112.205682. [PDF]
Petrovic MM, Nowacki J, Olivo V, Tsaneva-Atanasova K, Randall AD, Mellor JR. (2012) Inhibition of post-synaptic Kv7/KCNQ/M channels facilitates long-term potentiation in the hippocampus, PLoS One, volume 7, no. 2, DOI:10.1371/journal.pone.0030402. [PDF]
Benjamin O, Fitzgerald TH, Ashwin P, Tsaneva-Atanasova K, Chowdhury F, Richardson MP, Terry JR. (2012) A phenomenological model of seizure initiation suggests network structure may explain seizure frequency in idiopathic generalised epilepsy, J Math Neurosci, volume 2, no. 1, DOI:10.1186/2190-8567-2-1. [PDF]

2011

Rooke E, Bardy B, Tsaneva-Atanasova K. (2011) Toward a synergetic model of postural coordination dynamics, BIO Web of Conferences, volume 1, pages 00077-00077, DOI:10.1051/bioconf/20110100077. [PDF]
Nowacki J, Osinga HM, Brown JT, Randall AD, Tsaneva-Atanasova K. (2011) Sensitivity analysis to explain the excitability in a pyramidal neuron with application to Alzheimer’s disease, BMC neuroscience, volume 12, no. Suppl 1, pages P342-P342, DOI:10.1186/1471-2202-12-s1-p342.
Teka W, Tsaneva-Atanasova K, Bertram R, Tabak J. (2011) From plateau to pseudo-plateau bursting: making the transition, Bull Math Biol, volume 73, no. 6, pages 1292-1311, DOI:10.1007/s11538-010-9559-7. [PDF]
Kusev P, Ayton P, van Schaik P, Tsaneva-Atanasova K, Stewart N, Chater N. (2011) Judgments relative to patterns: how temporal sequence patterns affect judgments and memory, J Exp Psychol Hum Percept Perform, volume 37, no. 6, pages 1874-1886, DOI:10.1037/a0025589. [PDF]
Szalai R, Tsaneva-Atanasova K, Homer ME, Champneys AR, Kennedy HJ, Cooper NP. (2011) Nonlinear models of development, amplification and compression in the mammalian cochlea, Philos Trans A Math Phys Eng Sci, volume 369, no. 1954, pages 4183-4204, DOI:10.1098/rsta.2011.0192. [PDF]
Nowacki J, Osinga HM, Brown JT, Randall AD, Tsaneva-Atanasova K. (2011) A unified model of CA1/3 pyramidal cells: an investigation into excitability, Prog Biophys Mol Biol, volume 105, no. 1-2, pages 34-48, DOI:10.1016/j.pbiomolbio.2010.09.020. [PDF]

2010

Nowacki J, Mazlan S, Osinga HM, Tsaneva-Atanasova K. (2010) The role of large-conductance Calcium-activated (BK) channels in shaping bursting oscillations of a somatotroph cell model, Physica D: Nonlinear Phenomena, volume 239, no. 9, pages 485-493, DOI:10.1016/j.physd.2009.11.014. [PDF]
Osinga HM, Tsaneva-Atanasova KT. (2010) Dynamics of plateau bursting depending on the location of its equilibrium, J Neuroendocrinol, volume 22, no. 12, pages 1301-1314, DOI:10.1111/j.1365-2826.2010.02083.x. [PDF]
Tsaneva-Atanasova K, Osinga HM, Riess T, Sherman A. (2010) Full system bifurcation analysis of endocrine bursting models, J Theor Biol, volume 264, no. 4, pages 1133-1146, DOI:10.1016/j.jtbi.2010.03.030. [PDF]
Rackham OJL, Tsaneva-Atanasova K, Ganesh A, Mellor JR. (2010) A Ca-Based Computational Model for NMDA Receptor-Dependent Synaptic Plasticity at Individual Post-Synaptic Spines in the Hippocampus, Front Synaptic Neurosci, volume 2, DOI:10.3389/fnsyn.2010.00031. [PDF]
Armstrong SP, Caunt CJ, Fowkes RC, Tsaneva-Atanasova K, McArdle CA. (2010) Pulsatile and sustained gonadotropin-releasing hormone (GnRH) receptor signaling: does the ERK signaling pathway decode GnRH pulse frequency?, J Biol Chem, volume 285, no. 32, pages 24360-24371, DOI:10.1074/jbc.M110.115964. [PDF]
Tsaneva-Atanasova K, Osinga HM, Tabak J, Pedersen MG. (2010) Modeling mechanisms of cell secretion, Acta Biotheor, volume 58, no. 4, pages 315-327, DOI:10.1007/s10441-010-9115-8. [PDF]
Walker JJ, Terry JR, Tsaneva-Atanasova K, Armstrong SP, McArdle CA, Lightman SL. (2010) Encoding and decoding mechanisms of pulsatile hormone secretion, J Neuroendocrinol, volume 22, no. 12, pages 1226-1238, DOI:10.1111/j.1365-2826.2010.02087.x. [PDF]

2009

Tsaneva-Atanasova K. (2009) A Mathematical Study of Calcium Oscillations and Waves.
Tsaneva-Atanasova K, Burgo A, Galli T, Holcman D. (2009) Quantifying neurite growth mediated by interactions among secretory vesicles, microtubules, and actin networks, Biophys J, volume 96, no. 3, pages 840-857, DOI:10.1016/j.bpj.2008.10.036. [PDF]
Armstrong SP, Caunt CJ, Fowkes RC, Tsaneva-Atanasova K, McArdle CA. (2009) Pulsatile and sustained gonadotropin-releasing hormone (GnRH) receptor signaling: does the Ca2+/NFAT signaling pathway decode GnRH pulse frequency?, J Biol Chem, volume 284, no. 51, pages 35746-35757, DOI:10.1074/jbc.M109.063917. [PDF]
Tsaneva-Atanasova K, Sherman A. (2009) Accounting for near-normal glucose sensitivity in Kir6.2[AAA] transgenic mice, Biophys J, volume 97, no. 9, pages 2409-2418, DOI:10.1016/j.bpj.2009.07.060. [PDF]

2007

Tsaneva-Atanasova K, Azzopardi N, Galli T, Holcman D. (2007) Modeling vesicle trafficking and neurite growth, BIOPHYSICAL JOURNAL, pages 115A-115A. [PDF]
Ong HL, Liu X, Tsaneva-Atanasova K, Singh BB, Bandyopadhyay BC, Swaim WD, Russell JT, Hegde RS, Sherman A, Ambudkar IS. (2007) Relocalization of STIM1 for activation of store-operated Ca(2+) entry is determined by the depletion of subplasma membrane endoplasmic reticulum Ca(2+) store, J Biol Chem, volume 282, no. 16, pages 12176-12185, DOI:10.1074/jbc.M609435200. [PDF]
Tsaneva-Atanasova K, Sherman A, van Goor F, Stojilkovic SS. (2007) Mechanism of spontaneous and receptor-controlled electrical activity in pituitary somatotrophs: experiments and theory, J Neurophysiol, volume 98, no. 1, pages 131-144, DOI:10.1152/jn.00872.2006. [PDF]

2006

Bertram R, Sherman A, Nunemaker CS, Luciani DS, Pedersen MG, Zhang M, Tsaneva-Atanasova K, Satin LS. (2006) Evidence that calcium feedback and glycolytic oscillations are both important in pancreatic β-cells:: A computational and experimental study, DIABETES, volume 55, pages A369-A369. [PDF]
Tsaneva-Atanasova K, Nichols C, Arthur S. (2006) Accounting for near-normal glucose sensitivity in Kir6.2[AAA] transgenic mice, DIABETES, volume 55, pages A371-A371. [PDF]
Nunemaker CS, Bertram R, Sherman A, Tsaneva-Atanasova K, Daniel CR, Satin LS. (2006) Glucose modulates [Ca2+]i oscillations in pancreatic islets via ionic and glycolytic mechanisms, Biophys J, volume 91, no. 6, pages 2082-2096, DOI:10.1529/biophysj.106.087296. [PDF]
Tsaneva-Atanasova K, Zimliki CL, Bertram R, Sherman A. (2006) Diffusion of calcium and metabolites in pancreatic islets: killing oscillations with a pitchfork, Biophys J, volume 90, no. 10, pages 3434-3446, DOI:10.1529/biophysj.105.078360. [PDF]
Sneyd J, Tsaneva-Atanasova K, Reznikov V, Bai Y, Sanderson MJ, Yule DI. (2006) A method for determining the dependence of calcium oscillations on inositol trisphosphate oscillations, Proc Natl Acad Sci U S A, volume 103, no. 6, pages 1675-1680, DOI:10.1073/pnas.0506135103. [PDF]

2005

Reznikov V, Sneyd J, Tsaneva-Atanasova K, Yule DI. (2005) Dependence of CCK induced Ca²⁺_i oscillations on fluctuations in the cytosolic InsP₃ level, BIOPHYSICAL JOURNAL, volume 88, no. 1, pages 437A-437A. [PDF]
Nunemaker CS, Zhang M, Bertram R, Sherman A, Tsaneva-Atanasova K, Satin LS. (2005) Mouse beta-cells and islets differ in glucose responsiveness, DIABETES, volume 54, pages A407-A407. [PDF]
Tsaneva-Atanasova K, Shuttleworth TJ, Yule DI, Thompson JL, Sneyd J. (2005) Calcium Oscillations and Membrane Transport: The Importance of Two Time Scales, Multiscale Modeling & Simulation, volume 3, no. 2, pages 245-264, DOI:10.1137/030602472. [PDF]
Tsaneva-Atanasova K, Yule DI, Sneyd J. (2005) Calcium oscillations in a triplet of pancreatic acinar cells, Biophys J, volume 88, no. 3, pages 1535-1551, DOI:10.1529/biophysj.104.047357. [PDF]

2004

Sneyd J, Tsaneva-Atanasova K, Yule DI, Thompson JL, Shuttleworth TJ. (2004) Control of calcium oscillations by membrane fluxes, Proc Natl Acad Sci U S A, volume 101, no. 5, pages 1392-1396, DOI:10.1073/pnas.0303472101. [PDF]

2003

Sneyd J, Tsaneva-Atanasova K. (2003) Modeling Calcium Waves, Understanding Calcium Dynamics, Springer Berlin Heidelberg, 179-199, DOI:10.1007/978-3-540-44878-5_10. [PDF]
Sneyd J, Tsaneva-Atanasova K, Bruce JIE, Straub SV, Giovannucci DR, Yule DI. (2003) A model of calcium waves in pancreatic and parotid acinar cells, Biophys J, volume 85, no. 3, pages 1392-1405, DOI:10.1016/S0006-3495(03)74572-X. [PDF]

Showing 203 publications from Symplectic.